Finished writing persistent store.

services/git-bridge/src/uk/ac/ic/wlgitbridge/application/WLGitBridgeServer.java

@@ -51,6 +51,7 @@ public class WLGitBridgeServer {
     public void start() {
         try {
             jettyServer.start();
+            System.out.println();
             System.out.println("WriteLatex-Git Bridge server started");
             System.out.println("Listening on port: " + port);
             System.out.println("Root git directory path: " + rootGitDirectoryPath);

services/git-bridge/src/uk/ac/ic/wlgitbridge/util/Util.java

@@ -0,0 +1,16 @@
+package uk.ac.ic.wlgitbridge.util;
+
+/**
+ * Created by Winston on 19/11/14.
+ */
+public class Util {
+
+    public static String entries(int entries) {
+        if (entries == 1) {
+            return "entry";
+        } else {
+            return "entries";
+        }
+    }
+
+}

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/SnapshotFetcher.java

@@ -37,7 +37,7 @@ public class SnapshotFetcher implements PersistentStoreSource {
         for (Snapshot snapshot : newSnapshots) {
             persistentStore.addSnapshot(projectName, snapshot.getVersionID());
         }
-        System.out.println("Snapshots fetched: " + newSnapshots);
+        System.out.println("Fetched snapshots: " + newSnapshots);
         return newSnapshots;
     }
 
@@ -148,4 +148,7 @@ public class SnapshotFetcher implements PersistentStoreSource {
         newSnapshots.add(snapshot);
     }
 
+    public SortedSet<Integer> getVersions() {
+        return versions;
+    }
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/blob/Blob.java

@@ -1,11 +1,13 @@
 package uk.ac.ic.wlgitbridge.writelatex.filestore.blob;
 
 import uk.ac.ic.wlgitbridge.writelatex.api.request.exception.FailedConnectionException;
+import uk.ac.ic.wlgitbridge.writelatex.filestore.node.AttachmentNode;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreUpdater;
 
 /**
  * Created by Winston on 14/11/14.
  */
-public abstract class Blob {
+public abstract class Blob implements PersistentStoreUpdater<AttachmentNode> {
 
     public abstract byte[] getContents() throws FailedConnectionException;
 

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/blob/ByteBlob.java

@@ -1,5 +1,8 @@
 package uk.ac.ic.wlgitbridge.writelatex.filestore.blob;
 
+import uk.ac.ic.wlgitbridge.writelatex.filestore.node.AttachmentNode;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
+
 /**
  * Created by Winston on 14/11/14.
  */
@@ -16,4 +19,9 @@ public class ByteBlob extends Blob {
         return contents;
     }
 
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, AttachmentNode node) {
+        persistentStore.addFileNodeBlob(node.getProjectName(), node.getFilePath(), node.isChanged(), contents);
+    }
+
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/blob/ExternalBlob.java

@@ -5,6 +5,8 @@ import com.ning.http.client.AsyncHttpClient;
 import com.ning.http.client.HttpResponseBodyPart;
 import com.ning.http.client.Response;
 import uk.ac.ic.wlgitbridge.writelatex.api.request.exception.FailedConnectionException;
+import uk.ac.ic.wlgitbridge.writelatex.filestore.node.AttachmentNode;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
 
 import java.io.ByteArrayOutputStream;
 import java.io.IOException;
@@ -58,4 +60,9 @@ public class ExternalBlob extends Blob {
         }
     }
 
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, AttachmentNode node) {
+        persistentStore.addFileNodeExternal(node.getProjectName(), node.getFilePath(), node.isChanged(), node.getURL());
+    }
+
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/node/AttachmentNode.java

@@ -7,6 +7,7 @@ import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.ByteBlob;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.store.FileIndexStore;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.Blob;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.ExternalBlob;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
 
 import java.util.Map;
 
@@ -15,6 +16,8 @@ import java.util.Map;
  */
 public class AttachmentNode extends FileNode {
 
+    private String projectName;
+
     private final String url;
     private Blob blob;
 
@@ -45,6 +48,12 @@ public class AttachmentNode extends FileNode {
         return blob;
     }
 
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, String projectName) {
+        this.projectName = projectName;
+        getBlob().updatePersistentStore(persistentStore, this);
+    }
+
     public String getURL() {
         return url;
     }
@@ -58,4 +67,8 @@ public class AttachmentNode extends FileNode {
         }
     }
 
+    public String getProjectName() {
+        return projectName;
+    }
+
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/node/BlobNode.java

@@ -6,6 +6,7 @@ import uk.ac.ic.wlgitbridge.writelatex.filestore.RepositoryFile;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.Blob;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.ByteBlob;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.RawFileBlob;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
 
 import java.io.File;
 import java.io.IOException;
@@ -43,10 +44,18 @@ public class BlobNode extends FileNode {
         return blob;
     }
 
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, String projectName) {
+        try {
+            persistentStore.addFileNodeBlob(projectName, getFilePath(), isChanged(), getBlob().getContents());
+        } catch (FailedConnectionException e) {
+            throw new RuntimeException(e);
+        }
+    }
+
     private void writeChanged(File projectAttDirectory) throws FailedConnectionException, IOException {
         if (isChanged()) {
             writeToDisk(projectAttDirectory);
         }
     }
-
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/node/FileNode.java

@@ -3,6 +3,7 @@ package uk.ac.ic.wlgitbridge.writelatex.filestore.node;
 import uk.ac.ic.wlgitbridge.bridge.RawFile;
 import uk.ac.ic.wlgitbridge.writelatex.api.request.exception.FailedConnectionException;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.blob.Blob;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreUpdater;
 
 import java.io.File;
 import java.io.FileOutputStream;
@@ -13,7 +14,7 @@ import java.util.Map;
 /**
  * Created by Winston on 12/11/14.
  */
-public abstract class FileNode {
+public abstract class FileNode implements PersistentStoreUpdater<String> {
 
     private final String filePath;
     private final boolean changed;

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/node/WLDirectoryNode.java

@@ -8,6 +8,9 @@ import uk.ac.ic.wlgitbridge.writelatex.filestore.RepositoryFile;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.store.FileIndexStore;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.store.WLFileStore;
 import uk.ac.ic.wlgitbridge.writelatex.model.Snapshot;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreSource;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreUpdater;
 
 import java.io.File;
 import java.io.IOException;
@@ -20,22 +23,49 @@ import java.util.Map.Entry;
 /**
  * Created by Winston on 08/11/14.
  */
-public class WLDirectoryNode {
+public class WLDirectoryNode implements PersistentStoreSource, PersistentStoreUpdater<Void> {
 
     private final String projectName;
     private Map<String, FileNode> fileNodeTable;
     private FileIndexStore fileIndexStore;
 
-    public WLDirectoryNode(String projectName) {
-        this(projectName, new HashMap<String, FileNode>(), new FileIndexStore());
+    public WLDirectoryNode(String projectName, PersistentStoreAPI persistentStore) {
+        this(projectName);
+        initFromPersistentStore(persistentStore);
     }
 
-    public WLDirectoryNode(String projectName, Map<String, FileNode> fileNodeTable, FileIndexStore fileIndexStore) {
+    private WLDirectoryNode(String projectName) {
+        this.projectName = projectName;
+    }
+
+    private WLDirectoryNode(String projectName, Map<String, FileNode> fileNodeTable, FileIndexStore fileIndexStore) {
         this.projectName = projectName;
         this.fileNodeTable = fileNodeTable;
         this.fileIndexStore = fileIndexStore;
     }
 
+    @Override
+    public void initFromPersistentStore(PersistentStoreAPI persistentStore) {
+        fileNodeTable = new HashMap<String, FileNode>();
+        for (FileNode fileNode : persistentStore.getFileNodesForProjectName(projectName)) {
+            fileNodeTable.put(fileNode.getFilePath(), fileNode);
+        }
+        fileIndexStore = new FileIndexStore(projectName, persistentStore);
+    }
+
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, Void info) {
+        updateFileNodeTableInPersistentStore(persistentStore);
+        fileIndexStore.updatePersistentStore(persistentStore, projectName);
+    }
+
+    private void updateFileNodeTableInPersistentStore(PersistentStoreAPI persistentStore) {
+        persistentStore.deleteFileNodesForProjectName(projectName);
+        for (FileNode fileNode : fileNodeTable.values()) {
+            fileNode.updatePersistentStore(persistentStore, projectName);
+        }
+    }
+
     public List<FileNode> getFileNodes() {
         return new LinkedList<FileNode>(fileNodeTable.values());
     }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/store/FileIndexStore.java

@@ -1,22 +1,28 @@
 package uk.ac.ic.wlgitbridge.writelatex.filestore.store;
 
+import uk.ac.ic.wlgitbridge.writelatex.api.request.exception.FailedConnectionException;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.node.AttachmentNode;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.node.BlobNode;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.node.FileNode;
 import uk.ac.ic.wlgitbridge.writelatex.filestore.node.FileNodeIndexer;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreSource;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreUpdater;
 
 import java.util.HashMap;
-import java.util.LinkedList;
 import java.util.List;
 import java.util.Map;
+import java.util.Map.Entry;
 
 /**
  * Created by Winston on 08/11/14.
  */
-public class FileIndexStore implements FileNodeIndexer {
+public class FileIndexStore implements FileNodeIndexer, PersistentStoreSource, PersistentStoreUpdater<String> {
 
     private final Map<BlobHash, FileNode> blobHashMappings;
-    private final Map<String, FileNode> urlMappings;
+    private Map<String, FileNode> urlMappings;
+
+    private String projectName;
 
     public FileIndexStore(List<FileNode> fileNodes) {
         blobHashMappings = new HashMap<BlobHash, FileNode>();
@@ -26,8 +32,10 @@ public class FileIndexStore implements FileNodeIndexer {
         }
     }
 
-    public FileIndexStore() {
-        this(new LinkedList<FileNode>());
+    public FileIndexStore(String projectName, PersistentStoreAPI persistentStore) {
+        this.projectName = projectName;
+        blobHashMappings = new HashMap<BlobHash, FileNode>();
+        initFromPersistentStore(persistentStore);
     }
 
     @Override
@@ -40,6 +48,11 @@ public class FileIndexStore implements FileNodeIndexer {
         urlMappings.put(attachmentNode.getURL(), attachmentNode);
     }
 
+    @Override
+    public void initFromPersistentStore(PersistentStoreAPI persistentStore) {
+        urlMappings = persistentStore.getURLIndexTableForProjectName(projectName);
+    }
+
     public boolean hasAttachmentWithURL(String url) {
         return urlMappings.containsKey(url);
     }
@@ -48,6 +61,18 @@ public class FileIndexStore implements FileNodeIndexer {
         return urlMappings.get(url);
     }
 
+    @Override
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, String projectName) {
+        persistentStore.deleteURLIndexesForProjectName(projectName);
+        for (Entry<String, FileNode> urlMapping : urlMappings.entrySet()) {
+            try {
+                persistentStore.addURLIndex(projectName, urlMapping.getKey(), urlMapping.getValue().getContents());
+            } catch (FailedConnectionException e) {
+                throw new RuntimeException(e);
+            }
+        }
+    }
+
 }
 
 /*Winston is really cool

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/filestore/store/WLFileStore.java

@@ -10,6 +10,7 @@ import uk.ac.ic.wlgitbridge.writelatex.filestore.node.WLDirectoryNode;
 import uk.ac.ic.wlgitbridge.writelatex.model.Snapshot;
 import uk.ac.ic.wlgitbridge.writelatex.model.WLProject;
 import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreAPI;
+import uk.ac.ic.wlgitbridge.writelatex.model.db.PersistentStoreSource;
 
 import java.io.File;
 import java.io.IOException;
@@ -18,12 +19,14 @@ import java.util.*;
 /**
  * Created by Winston on 08/11/14.
  */
-public class WLFileStore {
+public class WLFileStore implements PersistentStoreSource {
 
     private final Map<String, WLDirectoryNode> fileStore;
     private final File rootGitDirectory;
     private final File attDirectory;
 
+    private PersistentStoreAPI persistentStore;
+
     public WLFileStore(File rootGitDirectory) {
         fileStore = new HashMap<String, WLDirectoryNode>();
         this.rootGitDirectory = rootGitDirectory;
@@ -33,7 +36,15 @@ public class WLFileStore {
 
     public WLFileStore(File rootGitDirectory, PersistentStoreAPI persistentStoreAPI) {
         this(rootGitDirectory);
+        initFromPersistentStore(persistentStoreAPI);
+    }
 
+    @Override
+    public void initFromPersistentStore(PersistentStoreAPI persistentStore) {
+        this.persistentStore = persistentStore;
+        for (String projectName : persistentStore.getProjectNames()) {
+            fileStore.put(projectName, new WLDirectoryNode(projectName, persistentStore));
+        }
     }
 
     public static void deleteInDirectory(File directory) {
@@ -64,6 +75,7 @@ public class WLFileStore {
                                                               projectName,
                                                               snapshot));
         }
+        directoryNode.updatePersistentStore(persistentStore, null);
         return writableRepositories;
     }
 
@@ -72,13 +84,15 @@ public class WLFileStore {
     }
 
     public void approveCandidateSnapshot(CandidateSnapshot candidateSnapshot) {
-        fileStore.put(candidateSnapshot.getProjectName(), candidateSnapshot.getDirectoryNode());
+        WLDirectoryNode directoryNode = candidateSnapshot.getDirectoryNode();
+        fileStore.put(candidateSnapshot.getProjectName(), directoryNode);
+        directoryNode.updatePersistentStore(persistentStore, null);
     }
 
     private WLDirectoryNode getDirectoryNodeForProjectName(String projectName) {
         WLDirectoryNode directoryNode = fileStore.get(projectName);
         if (directoryNode == null) {
-            directoryNode = new WLDirectoryNode(projectName);
+            directoryNode = new WLDirectoryNode(projectName, persistentStore);
             fileStore.put(projectName, directoryNode);
         }
         return directoryNode;

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/WLDataModel.java

@@ -29,10 +29,11 @@ public class WLDataModel implements CandidateSnapshotCallback {
         File rootGitDirectory = initRootGitDirectory(rootGitDirectoryPath);
         persistentStore = new WLGBPersistentStore(rootGitDirectory);
         projectStore = persistentStore.loadProjectStore();
+        System.out.println("Loaded projects: " + projectStore.getProjectNames().size() + ".");
         fileStore = persistentStore.loadFileStore();
+        System.out.println("Loaded file store and index tables.");
         List<String> excludedFromDeletion = projectStore.getProjectNames();
         excludedFromDeletion.add(".wlgb");
-        System.out.println("Not deleting: " + excludedFromDeletion);
         WLFileStore.deleteInDirectoryApartFrom(rootGitDirectory, excludedFromDeletion.toArray(new String[]{}));
     }
 

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/WLProject.java

@@ -15,6 +15,7 @@ import java.util.SortedSet;
  */
 public class WLProject implements PersistentStoreSource {
 
+    public static final int INVALID_VERSION_ID = -1;
     private final String name;
     private final Map<Integer, Snapshot> snapshots;
     private final SnapshotFetcher snapshotFetcher;
@@ -49,7 +50,7 @@ public class WLProject implements PersistentStoreSource {
     private void updateLatestSnapshot() {
         Snapshot latest = snapshotFetcher.getLatestSnapshot();
         if (latest == null) {
-            latestSnapshotID = -1;
+            latestSnapshotID = INVALID_VERSION_ID;
         } else {
             latestSnapshotID = latest.getVersionID();
         }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/db/PersistentStoreAPI.java

@@ -17,8 +17,8 @@ public interface PersistentStoreAPI {
 
     public void addProject(String name);
     public void addSnapshot(String projectName, int versionID);
-    public void addFileNodeBlob(String projectName, String fileName, int changed, byte[] blob);
-    public void addFileNodeExternal(String projectName, String fileName, int changed, String url);
+    public void addFileNodeBlob(String projectName, String fileName, boolean changed, byte[] blob);
+    public void addFileNodeExternal(String projectName, String fileName, boolean changed, String url);
     public void addURLIndex(String projectName, String url, byte[] blob);
 
     public List<String> getProjectNames();
@@ -26,4 +26,7 @@ public interface PersistentStoreAPI {
     public List<FileNode> getFileNodesForProjectName(String projectName);
     public Map<String, FileNode> getURLIndexTableForProjectName(String projectName);
 
+    public void deleteFileNodesForProjectName(String projectName);
+    public void deleteURLIndexesForProjectName(String projectName);
+
 }

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/db/PersistentStoreUpdater.java

@@ -0,0 +1,10 @@
+package uk.ac.ic.wlgitbridge.writelatex.model.db;
+
+/**
+ * Created by Winston on 19/11/14.
+ */
+public interface PersistentStoreUpdater<T> {
+
+    public void updatePersistentStore(PersistentStoreAPI persistentStore, T info);
+
+}

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/db/SQLiteWLDatabase.java

@@ -66,6 +66,11 @@ public class SQLiteWLDatabase {
     private static final String GET_URL_INDEXES_FOR_PROJECT_NAME =
             "SELECT `url`, `blob` FROM `url_index_store` WHERE `project_name` = ?";
 
+    private static final String DELETE_FILE_NODES_FOR_PROJECT_NAME =
+            "DELETE FROM `file_node_table` WHERE `project_name` = ?";
+    private static final String DELETE_URL_INDEXES_FOR_PROJECT_NAME =
+            "DELETE FROM `url_index_store` WHERE `project_name` = ?";
+
     private final File rootGitDirectory;
     private final Connection connection;
 
@@ -80,6 +85,9 @@ public class SQLiteWLDatabase {
     private PreparedStatement getFileNodesForProjectNameStatement;
     private PreparedStatement getURLIndexesForProjectNameStatement;
 
+    private PreparedStatement deleteFileNodesForProjectNameStatement;
+    private PreparedStatement deleteURLIndexesForProjectNameStatement;
+
     public SQLiteWLDatabase(File rootGitDirectory) throws SQLException, ClassNotFoundException {
         this.rootGitDirectory = rootGitDirectory;
         File databaseFile = new File(rootGitDirectory, "/.wlgb/wlgb.db");
@@ -108,6 +116,9 @@ public class SQLiteWLDatabase {
         getVersionIDsForProjectNameStatement = connection.prepareStatement(GET_VERSION_IDS_FOR_PROJECT_NAME);
         getFileNodesForProjectNameStatement = connection.prepareStatement(GET_FILE_NODES_FOR_PROJECT_NAME);
         getURLIndexesForProjectNameStatement = connection.prepareStatement(GET_URL_INDEXES_FOR_PROJECT_NAME);
+
+        deleteFileNodesForProjectNameStatement = connection.prepareStatement(DELETE_FILE_NODES_FOR_PROJECT_NAME);
+        deleteURLIndexesForProjectNameStatement = connection.prepareStatement(DELETE_URL_INDEXES_FOR_PROJECT_NAME);
     }
 
     public void addProject(String name) throws SQLException {
@@ -202,6 +213,18 @@ public class SQLiteWLDatabase {
         return urlIndexTable;
     }
 
+    public void deleteFileNodesForProjectName(String projectName) throws SQLException {
+        deleteFileNodesForProjectNameStatement.clearParameters();
+        deleteFileNodesForProjectNameStatement.setString(1, projectName);
+        deleteFileNodesForProjectNameStatement.executeUpdate();
+    }
+
+    public void deleteURLIndexesForProjectName(String projectName) throws SQLException {
+        deleteURLIndexesForProjectNameStatement.clearParameters();
+        deleteURLIndexesForProjectNameStatement.setString(1, projectName);
+        deleteURLIndexesForProjectNameStatement.executeUpdate();
+    }
+
     private void test() throws SQLException {
         addProject("testproj12");
         addSnapshot("testproj12", 0);
@@ -211,7 +234,7 @@ public class SQLiteWLDatabase {
         addURLIndex("testproj12", "http://someurl.com/urlname.jpg", "thebytes".getBytes());
     }
 
-    private static int booleanToInt(boolean b) {
+    public static int booleanToInt(boolean b) {
         if (b) {
             return 1;
         } else {
@@ -219,7 +242,7 @@ public class SQLiteWLDatabase {
         }
     }
 
-    private static boolean intToBoolean(int i) {
+    public static boolean intToBoolean(int i) {
         return i != 0;
     }
 

services/git-bridge/src/uk/ac/ic/wlgitbridge/writelatex/model/db/WLGBPersistentStore.java

@@ -57,18 +57,18 @@ public class WLGBPersistentStore implements PersistentStoreAPI {
     }
 
     @Override
-    public void addFileNodeBlob(String projectName, String fileName, int changed, byte[] blob) {
+    public void addFileNodeBlob(String projectName, String fileName, boolean changed, byte[] blob) {
         try {
-            database.addFileNodeBlob(projectName, fileName, changed, blob);
+            database.addFileNodeBlob(projectName, fileName, SQLiteWLDatabase.booleanToInt(changed), blob);
         } catch (SQLException e) {
             throw new RuntimeException(e);
         }
     }
 
     @Override
-    public void addFileNodeExternal(String projectName, String fileName, int changed, String url) {
+    public void addFileNodeExternal(String projectName, String fileName, boolean changed, String url) {
         try {
-            database.addFileNodeExternal(projectName, fileName, changed, url);
+            database.addFileNodeExternal(projectName, fileName, SQLiteWLDatabase.booleanToInt(changed), url);
         } catch (SQLException e) {
             throw new RuntimeException(e);
         }
@@ -119,4 +119,22 @@ public class WLGBPersistentStore implements PersistentStoreAPI {
         }
     }
 
+    @Override
+    public void deleteFileNodesForProjectName(String projectName) {
+        try {
+            database.deleteFileNodesForProjectName(projectName);
+        } catch (SQLException e) {
+            throw new RuntimeException(e);
+        }
+    }
+
+    @Override
+    public void deleteURLIndexesForProjectName(String projectName) {
+        try {
+            database.deleteURLIndexesForProjectName(projectName);
+        } catch (SQLException e) {
+            throw new RuntimeException(e);
+        }
+    }
+
 }